I'll have to look up the windshield info just to remind myself, but the basics are that the windshield panels need to be 1/4" (glassed both sides) or greater .... and your choice of rubber H-channel or windows will determine the thickness that the windows need to have. If you're adding a doubler around the opening, you'll also need to decide what width it needs to be so the H-channel or window frames land on wide enough wood. If you install the doublers on the inside of the window panels, note that you don't need to glass them if using a smooth wood - one of the mahogany or pseudo-mahogany woods etc. I do prefer to always at least put 1-1/2 oz glass or heavier on fir plywood since it's a peeled-ply and subject to checking. I should write a FAQ on that..... And yes, if you just want to cut the whole window panel out of thick enough wood, e.g. 1/2", then that's fine too. The frames don't weigh much .... it's the windows that are heavy.
bd